BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017E11LP1|AL427178
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1695 1878 0.0
>3x_Contig1695
Length = 14630
Score = 1878 bits (946), Expect = 0.0
Identities = 968/974 (99%), Gaps = 2/974 (0%)
Strand = Plus / Plus
Query: 1 agacaccgtggggaawtcagcatctggatacttctgctcttctactactaagtaatcttt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5803 agacaccgtggggaaatcagcatctggatacttctgctcttctactactaagtaatcttt 5862
Query: 61 accttcttcaagggataaaagttgtttactgatactttcaaaaatctcaaaacctactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5863 accttcttcaagggataaaagttgtttactgatactttcaaaaatctcaaaacctactcc 5922
Query: 121 atgcatcggagtataaacgaaccacggttcgttggttttcttattaacagcaccatcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5923 atgcatcggagtataaacgaaccacggttcgttggttttcttattaacagcaccatcaat 5982
Query: 181 caatgtagaaccaatcgcatcgatatatttcttggtcattttttccttgcaatcgatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5983 caatgtagaaccaatcgcatcgatatatttcttggtcattttttccttgcaatcgatgat 6042
Query: 241 ggtaccagtttgaggtgaactaaatggttctaagttatgaatgatggattcggcaataag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6043 ggtaccagtttgaggtgaactaaatggttctaagttatgaatgatggattcggcaataag 6102
Query: 301 cttgtcatgtggaggtatgatctgacatccattcgtatagtacactttgtatccgttatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6103 cttgtcatgtggaggtatgatctgacatccattcgtatagtacactttgtatccgttatc 6162
Query: 361 cattttcggattatgactcgcagtaatcatgattccaacggatgcaccggttgcattgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6163 cattttcggattatgactcgcagtaatcatgattccaacggatgcaccggttgcattgac 6222
Query: 421 ggtgaatggaaccaatggagtatggactaaagacttctcattctcatggttcaaatggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6223 ggtgaatggaaccaatggagtatggactaaagacttctcattctcatggttcaaatggaa 6282
Query: 481 cactttgaatcccaattgtagaaaagtatctactgtaaccttgccaaacagtctagagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6283 cactttgaatcccaattgtagaaaagtatctactgtaaccttgccaaacagtctagagtt 6342
Query: 541 gtgtctgtgatcgtgcccaactacaacggttaaattctccgggaactgcttcttaatata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6343 gtgtctgtgatcgtgcccaactacaacggttaaattctccgggaactgcttcttaatata 6402
Query: 601 tttagccaacccttgtgatgcttgtttcacagttaaggcgttcatcctattgaagcccgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6403 tttagccaacccttgtgatgcttgtttcacagttaaggcgttcatcctattgaagcccgc 6462
Query: 661 ctccatgcgacctctaagaccagcggttccaaatgcaatcatagtatccaatcttttatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6463 ctccatgcgacctctaagaccagcggttccaaatgcaatcatagtatccaatcttttatg 6522
Query: 721 caactccgtgatgtcgcccttcaaacagagttgaagtatctcattacgtgtctcttcgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6523 caactccgtgatgtcgcccttcaaacagagttgaagtatctcattacgtgtctcttcgac 6582
Query: 781 tttgtcatacttcaaccaattccgtacttttccttgcaggtccgaagaagggctctcgat 840
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 6583 tttgtcatacttcaaccaattccgtacttttccttgcaggtccgaaggaaggctctcgat 6642
Query: 841 tacttcagtttctgacattattcaatgcaattgtgctttattggatattaagaacttata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6643 tacttcagtttctgacattattcaatgcaattgtgctttattggatattaagaacttata 6702
Query: 901 cgagttctaatcctaacaatattcaatgtcgatgagacttcaattgacgg-rctgtcttt 959
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6703 cgagttctaatcctaacaatattcaatgtcgatgagacttcaattgacggagctgtcttt 6762
Query: 960 -acatgtttgccaa 972
|||||||||||||
Sbjct: 6763 aacatgtttgccaa 6776
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6438
Number of Sequences: 1807
Number of extensions: 6438
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)